LOC_Os01g01640.1 (ATRER1A, LOC_Os01g01640)


Aliases : ATRER1A, LOC_Os01g01640

Description : Protein RER1A OS=Arabidopsis thaliana (sp|o48670|rer1a_arath : 217.0)


Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00228520 RER1B, ATRER1B,... Protein RER1B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00051p00210110 ATRER1A,... Protein RER1A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g053172 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Als_g08194 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Als_g13577 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.65 ATRER1C1 Protein RER1C OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre12.g555350 ATRER1A Protein RER1C OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g11965 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04303 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15513 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
MA_10202775g0010 RER1B, ATRER1B Protein RER1B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g00750.1 ATRER1A Protein RER1A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g00759 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e017155_P001 ATRER1A, Zm00001e017155 Protein RER1A OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e025626_P001 ATRER1A, Zm00001e025626 Protein RER1A OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004932 Rer1 19 184
No external refs found!