LOC_Os01g04140.1 (LOC_Os01g04140)


Aliases : LOC_Os01g04140

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g04140.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g18550.1 LOC_Os01g18550 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g35254.1 ZAR1, LOC_Os01g35254 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os01g36766.1 LOC_Os01g36766 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g70030.1 LOC_Os01g70030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g01420.1 LOC_Os02g01420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g15330.1 LOC_Os02g15330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g56780.1 LOC_Os02g56780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g03710.1 LOC_Os04g03710 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g20460.1 LOC_Os04g20460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g23250.1 LOC_Os04g23250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g23280.1 LOC_Os04g23280 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g16900.1 LOC_Os06g16900 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g33030.1 LOC_Os06g33030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g40400.1 LOC_Os06g40400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g09540.1 LOC_Os07g09540 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g11430.1 LOC_Os07g11430 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g17540.1 LOC_Os07g17540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g31900.1 LOC_Os07g31900 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g04850.1 LOC_Os08g04850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g08950.1 LOC_Os08g08950 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g24590.1 LOC_Os08g24590 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g01900.1 LOC_Os09g01900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g04200.1 LOC_Os09g04200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g07330.1 LOC_Os09g07330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g12170.1 LOC_Os09g12170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g13900.1 LOC_Os09g13900 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g37220.1 LOC_Os09g37220 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g06660.1 LOC_Os10g06660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g07554.1 LOC_Os10g07554 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g08370.1 LOC_Os10g08370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g33480.1 LOC_Os10g33480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g10440.1 LOC_Os11g10440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA

No InterPro domains available for this sequence

No external refs found!