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  5. LOC_Os01g06130.2

LOC_Os01g06130.2 (LOC_Os01g06130)


Aliases : LOC_Os01g06130

Description : no hits & (original description: none)


Gene families : OG0001400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g06130.2
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT3G09120 No alias Protein of unknown function (DUF674) 0.06 OrthoFinder output from all 47 species
AT3G09140 No alias Protein of unknown function (DUF674) 0.02 OrthoFinder output from all 47 species
AT5G01150 No alias Protein of unknown function (DUF674) 0.07 OrthoFinder output from all 47 species
AT5G37320 No alias Protein of unknown function (DUF674) 0.03 OrthoFinder output from all 47 species
AT5G43240 No alias Protein of unknown function (DUF674) 0.04 OrthoFinder output from all 47 species
Aob_g21117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20220 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20221 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436214g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_58518g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007075_P001 Zm00001e007075 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e007081_P003 Zm00001e007081 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007083_P001 Zm00001e007083 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e016867_P001 Zm00001e016867 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016868_P001 Zm00001e016868 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e016869_P001 Zm00001e016869 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e016881_P001 Zm00001e016881 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR007750 DUF674 4 230
No external refs found!