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  5. LOC_Os01g07400.1

LOC_Os01g07400.1 (ATG18D, ATATG18D,...)


Aliases : ATG18D, ATATG18D, LOC_Os01g07400

Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07400.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g056111 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Dde_g04333 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
GSVIVT01010945001 AtATG18a Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.04 OrthoFinder output from all 47 species
Mp1g05420.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Msp_g44479 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g11717 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ore_g34807 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Sam_g27336 No alias component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e028371_P001 AtATG18a, Zm00001e028371 component ATG18 of autophagosome ATG9-2-18 membrane... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 263 288
No external refs found!