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  5. LOC_Os01g08470.1

LOC_Os01g08470.1 (LOC_Os01g08470)


Aliases : LOC_Os01g08470

Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08470.1

Target Alias Description ECC score Gene Family Method Actions
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.05 OrthoFinder output from all 47 species
AT3G24480 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from all 47 species
Adi_g016368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080109 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107400 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43377 LRX2 component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18349 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28758.t1 Aspi01Gene28758 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.05 OrthoFinder output from all 47 species
Cba_g04597 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01171 LRX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015416001 No alias Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Gb_12380 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os06g49100.1 LRX2, LOC_Os06g49100 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.03 OrthoFinder output from all 47 species
Smo134330 LRX2 Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Zm00001e013618_P001 LRX1, Zm00001e013618 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 122 180
No external refs found!