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  5. LOC_Os01g09640.1

LOC_Os01g09640.1 (LOC_Os01g09640)


Aliases : LOC_Os01g09640

Description : transcription factor (MYB-related)


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g09640.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00097250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G19000 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G70000 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G56840 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g007078 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Adi_g021554 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Adi_g056824 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Adi_g075106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112565 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aev_g12183 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aev_g24499 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aev_g24500 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ala_g05529 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Als_g20732 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Als_g39083 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g48089 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Als_g49186 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Aob_g16613 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aob_g22310 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Aop_g30539 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05859.t1 Aspi01Gene05859 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g038982 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g08737 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13916 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dac_g00698 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Dac_g16910 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dac_g42543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03859 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Dcu_g07543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Dcu_g15326 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Dde_g05736 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Dde_g25023 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27445 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01008241001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01022310001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_05002 No alias transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Gb_28483 No alias transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Gb_28926 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09280.1 LOC_Os01g09280 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os01g34060.1 LOC_Os01g34060 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64360.1 LOC_Os01g64360 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os05g37060.1 LOC_Os05g37060 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Len_g00582 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Len_g15601 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Len_g27852 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Len_g31113 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
MA_17466g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_41803g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Nbi_g04239 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ore_g01540 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ore_g06156 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ore_g21324 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ore_g29105 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Pir_g26062 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g28250 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g11755 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g31676 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013013 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc03g096350.3.1 Solyc03g096350 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Solyc03g119740.3.1 Solyc03g119740 transcription factor (MYB-related) 0.01 OrthoFinder output from all 47 species
Solyc04g005100.3.1 Solyc04g005100 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc04g008870.3.1 Solyc04g008870 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc05g052610.3.1 Solyc05g052610 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Solyc07g026680.2.1 Solyc07g026680 transcription factor (MYB-related) 0.01 OrthoFinder output from all 47 species
Solyc08g065380.3.1 Solyc08g065380 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Spa_g04347 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g15891 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g16329 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Spa_g26734 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Spa_g53976 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e002313_P001 Zm00001e002313 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e006540_P001 Zm00001e006540 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e019254_P001 Zm00001e019254 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Zm00001e025446_P001 Zm00001e025446 transcription factor (MYB-related) 0.01 OrthoFinder output from all 47 species
Zm00001e025783_P002 Zm00001e025783 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e025784_P001 Zm00001e025784 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e025946_P002 Zm00001e025946 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e031738_P001 Zm00001e031738 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e031755_P001 Zm00001e031755 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006559 L-phenylalanine catabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 125 169
No external refs found!