Aliases : LOC_Os01g10090
Description : Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana (sp|q9lnp2|ppr47_arath : 399.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g10090.1 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g004836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07978 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g25067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32783 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37465 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13433 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g24714 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24747 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36029 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03840 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26537 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47378 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27561 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g33192 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03536 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g33113 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04690 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05567 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20670 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29852 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36311 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g69088 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G071400.1 | Ceric.02G071400 | not classified & original description: pacid=50584970... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05672 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30131 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g42645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g45650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22846 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g07780.1 | OTP84, LOC_Os09g07780 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03276 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18855 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04822 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_794605g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03906 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23085 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g33995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45978 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25933 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g22790 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43621 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g21944 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27231 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29286 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29816 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g065410.3.1 | CRR22, Solyc02g065410 | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g040060.3.1 | EMB2758, Solyc11g040060 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05402 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14568 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000621_P001 | CRR22, Zm00001e000621 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008200_P001 | Zm00001e008200 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 351 | 397 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 155 |
| IPR002885 | Pentatricopeptide_repeat | 249 | 297 |
| IPR002885 | Pentatricopeptide_repeat | 425 | 450 |
| IPR002885 | Pentatricopeptide_repeat | 215 | 244 |
| IPR002885 | Pentatricopeptide_repeat | 77 | 102 |
| IPR002885 | Pentatricopeptide_repeat | 187 | 208 |
| No external refs found! |
