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  5. LOC_Os01g11240.1

LOC_Os01g11240.1 (LOC_Os01g11240)


Aliases : LOC_Os01g11240

Description : no hits & (original description: none)


Gene families : OG0000429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g11240.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00107900 SVB,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00086650 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G46230 No alias Protein of unknown function, DUF538 0.02 OrthoFinder output from all 47 species
Als_g02750 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Aob_g06321 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04002.t1 SVB, Aspi01Gene04002 regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12834.t1 SVB, Aspi01Gene12834 regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53399.t1 Aspi01Gene53399 regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56563.t1 Aspi01Gene56563 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30200 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Ceric.32G021100.1 Ceric.32G021100 regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.04 OrthoFinder output from all 47 species
Dde_g19288 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.04 OrthoFinder output from all 47 species
Gb_01251 SVB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12298 SVB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12496 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40920 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02850.1 LOC_Os07g02850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g02880.1 LOC_Os07g02880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g02900.1 LOC_Os07g02900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g02920.1 LOC_Os07g02920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g38210.1 LOC_Os11g38210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g38240.1 SVB, LOC_Os11g38240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435514g0030 SVB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_304675g0010 SVB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_73238g0010 SVB no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_813524g0010 SVB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g35998 SVB regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g37367 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Pnu_g18315 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Ppi_g18006 SVB regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Tin_g35207 SVB regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Tin_g38890 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Zm00001e004354_P001 Zm00001e004354 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020996_P001 SVB, Zm00001e020996 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 27 139
No external refs found!