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  5. LOC_Os01g12880.1

LOC_Os01g12880.1 (LOC_Os01g12880)


Aliases : LOC_Os01g12880

Description : TOM endomembrane trafficking associated protein


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
AT1G21380 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
AT1G76970 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
Aob_g06381 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18366.t1 Aspi01Gene18366 ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0162.g054173 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06382 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10821 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08083 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39498 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10303853g0010 No alias TOM1-like protein 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
MA_18253g0010 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Mp5g05840.1 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Pnu_g16580 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000824 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g15243 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc08g068370.3.1 Solyc08g068370 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Spa_g05647 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016401_P001 Zm00001e016401 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e021369_P002 Zm00001e021369 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e026110_P002 Zm00001e026110 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Zm00001e029150_P001 Zm00001e029150 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Zm00001e031902_P001 Zm00001e031902 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004152 GAT_dom 188 262
IPR002014 VHS_dom 5 126
No external refs found!