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  5. LOC_Os01g13740.1

LOC_Os01g13740.1 (ATGLK1, GPRI1, GLK1,...)


Aliases : ATGLK1, GPRI1, GLK1, LOC_Os01g13740

Description : G2-like GARP transcription factor


Gene families : OG0001485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13740.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00133630 ATGLK1, GPRI1,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT5G44190 GPRI2, ATGLK2, GLK2 GOLDEN2-like 2 0.06 OrthoFinder output from all 47 species
Adi_g009495 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g07283 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g01901 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g18484 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g07360 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g12665 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0170.g055586 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0359.g066821 APRR2, PRR2 not classified & original description: CDS=151-1668 0.03 OrthoFinder output from all 47 species
Ceric.16G061900.1 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.21G073900.1 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g16068 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01020604001 ATGLK1, GPRI1, GLK1 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Lfl_g07798 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.05 OrthoFinder output from all 47 species
Msp_g32592 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g09725 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo428906 APRR2, PRR2 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Solyc07g053630.4.1 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g46590 APRR2, PRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51768 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016357_P002 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e036073_P002 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 218 267
No external refs found!