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  5. LOC_Os01g18210.1

LOC_Os01g18210.1 (ROC4, LOC_Os01g18210)


Aliases : ROC4, LOC_Os01g18210

Description : protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g18210.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00158000 ROC4,... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
AT5G13120 ATCYP20-2, CYP20-2 cyclophilin 20-2 0.04 OrthoFinder output from all 47 species
Adi_g060434 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12028 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene06519.t1 Aspi01Gene06519 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06523.t2 ROC1, Aspi01Gene06523 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012462 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=264-1001 0.02 OrthoFinder output from all 47 species
Ceric.24G043400.1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G051100.1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000402.47 ROC4 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001636.9 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre01.g002300 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cre12.g495951 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
GSVIVT01000919001 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.08 OrthoFinder output from all 47 species
GSVIVT01024047001 No alias Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Gb_11317 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.02 OrthoFinder output from all 47 species
Mp7g15930.1 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.07 OrthoFinder output from all 47 species
Pir_g55179 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22050 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016829 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=122-877 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025138 ROC2 EC_5.2 cis-trans-isomerase & original description: CDS=21-524 0.02 OrthoFinder output from all 47 species
Sam_g46664 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.06 OrthoFinder output from all 47 species
Spa_g55953 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014689_P001 Zm00001e014689 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Zm00001e014690_P001 Zm00001e014690 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Zm00001e027678_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 77 232
No external refs found!