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  5. LOC_Os01g19740.1

LOC_Os01g19740.1 (CP12-1, CP12, LOC_Os01g19740)


Aliases : CP12-1, CP12, LOC_Os01g19740

Description : Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana (sp|q9lzp9|cp122_arath : 91.3)


Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g19740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00175560 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Adi_g016914 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Adi_g048511 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Adi_g106137 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Aob_g00251 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11309.t1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63650.t1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dac_g12215 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dac_g32821 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Dcu_g21000 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dde_g03082 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14018 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ehy_g17531 CP12-3 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Len_g42311 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Mp2g10550.1 CP12-3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g08879 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Ore_g22166 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Pnu_g05976 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33458 No alias regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Pp3c21_11130V3.1 CP12-1, CP12,... CP12 domain-containing protein 2 0.01 OrthoFinder output from all 47 species
Smo105078 CP12-1, CP12 Calvin cycle protein CP12-1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc01g079470.4.1 CP12-1, CP12,... no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc06g009630.1.1 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g04578 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Tin_g09684 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001432_P001 CP12-1, CP12,... Calvin cycle protein CP12-1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e036178_P001 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003823 CP12_dom 54 123
No external refs found!