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  5. LOC_Os01g19970.1

LOC_Os01g19970.1 (ATMYB12, PFG1, MYB12,...)


Aliases : ATMYB12, PFG1, MYB12, LOC_Os01g19970

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g19970.1

Target Alias Description ECC score Gene Family Method Actions
AT3G11440 ATMYB65, MYB65 myb domain protein 65 0.14 OrthoFinder output from all 47 species
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.01 OrthoFinder output from all 47 species
Adi_g011817 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059698 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67207.t1 ATMIXTA, MYB16,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g69919 AtMYB40, MYB40 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09953 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16845 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34252 ATMYB94, ATMYBCP70, MYB94 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g52410.1 ATMYB38, MYB38,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
LOC_Os01g74410.1 ATMYB59-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g04210.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Lfl_g17349 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_31666g0010 ATMYB4, MYB4 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_45091g0010 MYB3, ATMYB3 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_8464929g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_9818613g0010 MYB3, ATMYB3 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018494 AtMYB50, MYB50 not classified & original description: CDS=626-958 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!