LOC_Os01g20110.1 (LOC_Os01g20110)


Aliases : LOC_Os01g20110

Description : Uncharacterized protein At4g37920 OS=Arabidopsis thaliana (sp|q84wn0|y4920_arath : 419.0)


Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g20110.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223650 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00227230 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G37920 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Adi_g079128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23821 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30042.t1 Aspi01Gene30042 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034818 No alias not classified & original description: CDS=53-1405 0.02 OrthoFinder output from all 47 species
Ceric.23G023200.1 Ceric.23G023200 not classified & original description: pacid=50611197... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.60 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre18.g748397 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g06849 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.02 OrthoFinder output from all 47 species
GSVIVT01003846001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01008964001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g18242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008297 No alias not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017048 No alias not classified & original description: CDS=50-1423 0.03 OrthoFinder output from all 47 species
Sam_g30268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo77953 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g091640.3.1 Solyc02g091640 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g04497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029280_P001 Zm00001e029280 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!