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  5. LOC_Os01g25386.1

LOC_Os01g25386.1 (EST3, MRP4, ATMRP4,...)


Aliases : EST3, MRP4, ATMRP4, ABCC4, LOC_Os01g25386

Description : subfamily ABCC transporter


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g25386.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00226270 MRP6, ATMRP6,... ABC transporter C family member 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.02 OrthoFinder output from all 47 species
AT3G13080 ABCC3, ATMRP3, MRP3 multidrug resistance-associated protein 3 0.04 OrthoFinder output from all 47 species
AT3G60970 MRP15, ABCC15, ATMRP15 multidrug resistance-associated protein 15 0.03 OrthoFinder output from all 47 species
Adi_g056548 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06181 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14941 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29404 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07150 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10954 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19281 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27220 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07445 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16130 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20128 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44914 AtABCC2, ABCC2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34007 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29615 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05227.t2 ATMRP12, MRP12,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16912.t1 MRP9, ABCC9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22437.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64352.t2 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007991 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-4125 0.03 OrthoFinder output from all 47 species
Cba_g07486 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14096 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38812 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74175 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G016300.1 ATABCC5, MRP5,... subfamily ABCC transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G019800.1 EST3, MRP4,... subfamily ABCC transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G061900.1 ABCC1, ATABCC1,... subfamily ABCC transporter & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001254.8 MRP10, ATMRP10, ABCC14 No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.190 ATABCC5, MRP5,... ABC transporter C family member 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.191 ATMRP12, MRP12, ABCC11 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.4 ATMRP12, MRP12, ABCC11 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre03.g174050 ABCC12, MRP13, ATMRP13 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Dac_g15072 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39648 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26331 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21779 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019467001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_37462 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g04920.1 ATABCC5, MRP5,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Len_g40215 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434717g0010 ATABCC5, MRP5,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
MA_380601g0010 MRP6, ATMRP6, ABCC8 ABC transporter C family member 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g13400.1 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Msp_g31848 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43737 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05007 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15997 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29525 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32692 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43714 ABCC12, MRP13, ATMRP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04405 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07505 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12952 ATMRP14, ABCC10, MRP14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13013 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29473 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-2715 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004014 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=118-4101 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4845 0.02 OrthoFinder output from all 47 species
Sam_g39021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo107555 MRP15, ABCC15, ATMRP15 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo171469 MRP6, ATMRP6, ABCC8 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo417771 ATMRP12, MRP12, ABCC11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo99030 MRP6, ATMRP6, ABCC8 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc07g065320.4.1 ABCC3, ATMRP3,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Solyc09g075020.3.1 EST3, MRP4,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Solyc10g024420.3.1 MRP9, ABCC9,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Tin_g12692 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23395 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45327 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026288_P002 MRP10, ATMRP10,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 1004 1208
IPR011527 ABC1_TM_dom 349 614
IPR003439 ABC_transporter-like_ATP-bd 1302 1450
IPR003439 ABC_transporter-like_ATP-bd 683 816
No external refs found!