LOC_Os01g29870.1 (ATPGP4, PGP4, ABCB4,...)


Aliases : ATPGP4, PGP4, ABCB4, MDR4, LOC_Os01g29870

Description : ABC transporter B family member 7 OS=Arabidopsis thaliana (sp|q9fhf1|ab7b_arath : 97.4)


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g29870.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G02520 PGP11 P-glycoprotein 11 0.02 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15862 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05873.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46795.t1 PGP2, Aspi01Gene46795 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24784 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20229 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09264 PGP20 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011381001 ABCB19,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
GSVIVT01021366001 PGP9 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os08g05690.1 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Msp_g19766 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04453 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27278 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16181 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18874 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31570 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27139 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48720 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo176522 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Spa_g03247 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g18839 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041760_P001 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!