LOC_Os01g31470.1 (AMSH1, LOC_Os01g31470)


Aliases : AMSH1, LOC_Os01g31470

Description : deubiquitinase (AMSH)


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g31470.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g10411 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23492 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57402 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16647.t1 AMSH1, Aspi01Gene16647 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.55 AMSH2 Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g42609 AMSH1 deubiquitinase *(AMSH) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008314001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Solyc03g119330.3.1 AMSH1, Solyc03g119330 deubiquitinase (AMSH) 0.03 OrthoFinder output from all 47 species
Zm00001e017595_P001 AMSH1, Zm00001e017595 deubiquitinase (AMSH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR015063 USP8_dimer 17 108
IPR000555 JAMM/MPN+_dom 340 445
No external refs found!