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  5. LOC_Os01g32780.1

LOC_Os01g32780.1 (LOC_Os01g32780)


Aliases : LOC_Os01g32780

Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g32780.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00160510 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g079009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00422 PHOS32, ATPHOS32 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37226.t1 Aspi01Gene37226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49546.t1 Aspi01Gene49546 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010938 No alias not classified & original description: CDS=155-715 0.02 OrthoFinder output from all 47 species
Azfi_s0303.g063793 No alias not classified & original description: CDS=117-590 0.03 OrthoFinder output from all 47 species
Cba_g04989 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G005900.1 Ceric.28G005900 not classified & original description: pacid=50570573... 0.04 OrthoFinder output from all 47 species
Dac_g39061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05991 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g28856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022496001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01024846001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01035248001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_04118 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20331 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63010.1 LOC_Os01g63010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g20886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24168 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10063081g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431338g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10437265g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_108930g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_111185g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_139433g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_57598g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_62320g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02210.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g00168 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022124 No alias not classified & original description: CDS=790-1359 0.04 OrthoFinder output from all 47 species
Sam_g08504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079410.2.1 Solyc02g079410 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g076200.3.1 Solyc04g076200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g054270.2.1 Solyc05g054270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31160 No alias HUB ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005689_P006 Zm00001e005689 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e020196_P001 Zm00001e020196 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039685_P001 Zm00001e039685 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004334 fumarylacetoacetase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP HCCA
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 12 164
No external refs found!