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  5. LOC_Os01g38610.1

LOC_Os01g38610.1 (LOC_Os01g38610)


Aliases : LOC_Os01g38610

Description : transcription factor (bHLH)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g38610.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00228970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00184910 LRL1,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00079p00137860 BEE3,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 OrthoFinder output from all 47 species
AT1G18400 BEE1 BR enhanced expression 1 0.03 OrthoFinder output from all 47 species
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G27740 RSL4 root hair defective 6-like 4 0.02 OrthoFinder output from all 47 species
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.02 OrthoFinder output from all 47 species
AT2G24260 LRL1 LJRHL1-like 1 0.05 OrthoFinder output from all 47 species
AT4G28800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G58010 LRL3 LJRHL1-like 3 0.03 OrthoFinder output from all 47 species
Adi_g036691 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075291 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37842 SPT bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34054 UNE12 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19085 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29424 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41589 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05129.t1 RSL2, Aspi01Gene05129 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32833.t1 RSL2, Aspi01Gene32833 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46366.t1 HEC2, Aspi01Gene46366 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54622.t1 LRL3, Aspi01Gene54622 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54623.t1 LRL3, Aspi01Gene54623 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67543.t1 SPT, Aspi01Gene67543 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038807 HEC1 bHLH-type transcription factor & original description: CDS=1-1287 0.06 OrthoFinder output from all 47 species
Cba_g25222 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G036800.1 SPT, Ceric.22G036800 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.29G020000.1 HEC1, Ceric.29G020000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.34G030200.1 BPEp, ZCW32,... regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Dac_g09242 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13296 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23770 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Dcu_g51679 HEC2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02837 GT140, IND1, IND, EDA33 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g43893 HEC1 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05791 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g06624 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ehy_g26357 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28520 ALC bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008299001 BEE3 External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
GSVIVT01009479001 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
LOC_Os02g47660.1 CIB1, LOC_Os02g47660 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08500.1 LRL3, LOC_Os06g08500 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os08g01700.1 HEC3, LOC_Os08g01700 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os12g40590.1 SPT, LOC_Os12g40590 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Len_g13542 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g37660 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
MA_100071g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10344244g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_120179g0010 UNE12 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_14417g0020 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_306658g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_78485g0010 RSL4 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Mp6g21470.1 RSL2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Ore_g14316 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31298 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34453 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18219 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26288 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60433 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ppi_g32176 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo402301 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Smo404767 RSL4 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Smo413232 RHD6 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Smo418491 RSL2 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Solyc02g062690.3.1 BEE2, Solyc02g062690 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc02g091440.2.1 RHD6, Solyc02g091440 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc03g034000.3.1 BEE2, Solyc03g034000 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc03g119390.4.1 BEE3, Solyc03g119390 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc04g077960.1.1 RSL2, Solyc04g077960 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc06g083170.3.1 Solyc06g083170 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc09g064920.3.1 Solyc09g064920 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc09g097870.4.1 Solyc09g097870 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc09g098110.4.1 Solyc09g098110 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc10g018510.2.1 UNE10, Solyc10g018510 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc12g036470.2.1 BEE3, Solyc12g036470 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Solyc12g088790.3.1 HEC2, Solyc12g088790 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc12g098620.2.1 Solyc12g098620 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Spa_g41791 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51777 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Tin_g08390 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006917_P001 PIL5, PIF1,... transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Zm00001e020477_P001 Zm00001e020477 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e022005_P003 Zm00001e022005 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Zm00001e027758_P002 Zm00001e027758 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e029147_P001 HEC3, Zm00001e029147 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e041668_P001 PIL5, PIF1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 362 401
No external refs found!