1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g39110.1

LOC_Os01g39110.1 (AtIDD7, IDD7, LOC_Os01g39110)


Aliases : AtIDD7, IDD7, LOC_Os01g39110

Description : C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g39110.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00120910 IDD4, AtIDD4,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.04 OrthoFinder output from all 47 species
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.03 OrthoFinder output from all 47 species
AT3G50700 IDD2, AtIDD2 indeterminate(ID)-domain 2 0.06 OrthoFinder output from all 47 species
AT4G02670 AtIDD12, IDD12 indeterminate(ID)-domain 12 0.04 OrthoFinder output from all 47 species
Adi_g044340 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g069013 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g099246 NUC not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g04829 IDD16, AtIDD16 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g02498 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g18581 JKD not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63551.t1 MGP, Aspi01Gene63551 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015869 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G021500.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.17G030700.1 MGP, Ceric.17G030700 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g07841 AtIDD7, IDD7 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29791 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003119001 AtIDD12, IDD12 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
GSVIVT01010284001 IDD4, AtIDD4 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01020612001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 OrthoFinder output from all 47 species
GSVIVT01025166001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
Gb_17209 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os01g51590.1 LOC_Os01g51590 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.03 OrthoFinder output from all 47 species
LOC_Os08g36390.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g16339 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g31581 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g30618 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10426334g0010 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_10426334g0030 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10430013g0020 MGP C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_10430137g0020 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_10431498g0010 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g17643 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g27424 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g22200 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g28092 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g07601 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009246 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g085580.4.1 Solyc02g085580 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g39904 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000780_P001 Zm00001e000780 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e004751_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e016559_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035365_P003 MGP, Zm00001e035365 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 94 116
No external refs found!