1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g39330.1

LOC_Os01g39330.1 (LOC_Os01g39330)


Aliases : LOC_Os01g39330

Description : transcription factor (bHLH)


Gene families : OG0011158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011158_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g39330.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00208400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AT5G56960 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.09 OrthoFinder output from all 47 species
GSVIVT01015189001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_15442 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g09990.1 LOC_Os01g09990 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_317126g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc07g039570.3.1 Solyc07g039570 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e020505_P001 Zm00001e020505 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e027779_P001 Zm00001e027779 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 267 312
No external refs found!