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  5. LOC_Os01g40070.1

LOC_Os01g40070.1 (LOC_Os01g40070)


Aliases : LOC_Os01g40070

Description : Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana (sp|q94k49|alp1_arath : 132.0)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g40070.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.18 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.04 OrthoFinder output from all 47 species
Adi_g030966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g032595 No alias component *(HHP1) of histone deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Adi_g109913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21380 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08000.t1 Aspi01Gene08000 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14487.t1 Aspi01Gene14487 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25549.t1 Aspi01Gene25549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27301.t1 Aspi01Gene27301 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_33567 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g15131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_7435g0010 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g14130.1 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08471 No alias component *(HHP1) of histone deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Pp3c18_10320V3.1 Pp3c18_10320 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018320 No alias not classified & original description: CDS=1-1524 0.04 OrthoFinder output from all 47 species
Solyc05g054670.3.1 Solyc05g054670 Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.18 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 340 496
No external refs found!