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  5. LOC_Os01g40200.1

LOC_Os01g40200.1 (ATMYA1, XI-1, MYA1,...)


Aliases : ATMYA1, XI-1, MYA1, LOC_Os01g40200

Description : Myosin-11 OS=Arabidopsis thaliana (sp|f4hwy6|myo11_arath : 477.0)


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g40200.1

Target Alias Description ECC score Gene Family Method Actions
AT2G31900 XIF, ATMYO5, ATXIF myosin-like protein XIF 0.04 OrthoFinder output from all 47 species
Adi_g089073 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18391 ATMYA1, XI-1, MYA1 class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013653 ATVIIIA, VIIIA not classified & original description: CDS=1824-4091 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023602 ATM1 not classified & original description: CDS=1-723 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036557 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0793.g087255 ATXIK, XI-17, XIK not classified & original description: CDS=258-4499 0.03 OrthoFinder output from all 47 species
Azfi_s1042.g095921 ATXIK, XI-17, XIK not classified & original description: CDS=308-3955 0.04 OrthoFinder output from all 47 species
Cba_g07782 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Ceric.37G005700.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000056.26 ATXIG, XIG Myosin-13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g15523 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06522 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022474001 ATXIK, XI-17, XIK Myosin-17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036267001 ATXIE, XIE Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
GSVIVT01038493001 ATXIK, XI-17, XIK Myosin-17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g51630.1 ATXIE, XIE,... Myosin-11 OS=Arabidopsis thaliana (sp|f4hwy6|myo11_arath : 393.0) 0.04 OrthoFinder output from all 47 species
MA_16896g0010 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Msp_g15466 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Nbi_g01490 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14081 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Pir_g11836 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09501 ATVIIIA, VIIIA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59954 XI-15, ATXI-I, XI-I class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Sam_g13734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g081540.4.1 XIF, ATMYO5,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Spa_g07085 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Tin_g31375 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Zm00001e012044_P001 XIF, ATMYO5,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e027768_P005 ATMYA1, XI-1,... Myosin-11 OS=Arabidopsis thaliana (sp|f4hwy6|myo11_arath : 578.0) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 80 97
IPR002710 Dilute_dom 582 685
No external refs found!