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  5. LOC_Os01g40410.1

LOC_Os01g40410.1 (LOC_Os01g40410)


Aliases : LOC_Os01g40410

Description : solute transporter (AAAP)


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g40410.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g010796 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016347 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10647 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36434 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32158 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47786 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08352 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09144 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68476 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21976.t1 Aspi01Gene21976 solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24740.t1 Aspi01Gene24740 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46053.t1 Aspi01Gene46053 solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010795 No alias solute transporter *(AAAP) & original description: CDS=35-1210 0.05 OrthoFinder output from all 47 species
Azfi_s0120.g046809 No alias solute transporter *(AAAP) & original description: CDS=42-1736 0.03 OrthoFinder output from all 47 species
Azfi_s0870.g090592 No alias solute transporter *(AAAP) & original description: CDS=69-1490 0.03 OrthoFinder output from all 47 species
Ceric.10G023100.1 Ceric.10G023100 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G020200.1 Ceric.35G020200 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g18151 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19618 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08582 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04820 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020261001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01033627001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
LOC_Os01g41420.1 LOC_Os01g41420 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Len_g59781 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06617 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14582 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13742 No alias solute transporter *(AAAP) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001319 No alias solute transporter *(AAAP) & original description: CDS=1-1509 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017489 No alias solute transporter *(AAAP) & original description: CDS=1-1299 0.04 OrthoFinder output from all 47 species
Sam_g28561 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g063040.4.1 Solyc03g063040 Amino acid transporter AVT1B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g063050.1.1 Solyc03g063050 Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g061270.2.1 Solyc06g061270 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Spa_g48860 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11671 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039154_P004 Zm00001e039154 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 68 452
No external refs found!