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  5. LOC_Os01g41420.1

LOC_Os01g41420.1 (LOC_Os01g41420)


Aliases : LOC_Os01g41420

Description : solute transporter (AAAP)


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g41420.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00251660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
AMTR_s00010p00252100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00056580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g104357 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109983 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10647 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37047 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47786 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03383 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68476 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24740.t1 Aspi01Gene24740 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46053.t1 Aspi01Gene46053 solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64720.t1 Aspi01Gene64720 solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010835 No alias solute transporter *(AAAP) & original description: CDS=1-1098 0.02 OrthoFinder output from all 47 species
Ceric.04G055400.1 Ceric.04G055400 not classified & original description: pacid=50630661... 0.03 OrthoFinder output from all 47 species
Ceric.31G054000.1 Ceric.31G054000 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.35G020200.1 Ceric.35G020200 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.8 No alias Amino acid transporter AVT1B OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g14297 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19618 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31336 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08582 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26363 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27173 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28882 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011406001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
GSVIVT01020261001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_00870 No alias Amino acid transporter AVT1H OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_27840 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g40410.1 LOC_Os01g40410 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g38660.1 LOC_Os04g38660 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g38670.1 LOC_Os04g38670 Amino acid transporter AVT1I OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g19240.1 LOC_Os11g19240 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Lfl_g21803 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426730g0010 No alias solute transporter (AAAP) 0.05 OrthoFinder output from all 47 species
MA_10430942g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10430942g0030 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_17204g0020 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_60453g0010 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Msp_g19411 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26461 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13243 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25905 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42250 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43892 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43893 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12008 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16581 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31949 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017489 No alias solute transporter *(AAAP) & original description: CDS=1-1299 0.02 OrthoFinder output from all 47 species
Solyc03g013160.4.1 Solyc03g013160 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Solyc03g013440.4.1 Solyc03g013440 solute transporter (AAAP) 0.05 OrthoFinder output from all 47 species
Solyc03g063050.1.1 Solyc03g063050 Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g078150.3.1 Solyc03g078150 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Spa_g15013 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40129 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52548 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07839 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13490 No alias solute transporter *(AAAP) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g20653 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 37 411
No external refs found!