LOC_Os01g45760.1 (YUC4, LOC_Os01g45760)

Aliases : YUC4, LOC_Os01g45760

Description : flavin monooxygenase (YUCCA)

Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g45760.1
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00105010	YUC2,...	Phytohormones.auxin.synthesis.indole-3-pyruvic acid...	0.03	OrthoFinder output from all 47 species
AT1G04180	YUC9	YUCCA 9	0.02	OrthoFinder output from all 47 species
AT1G04610	YUC3	YUCCA 3	0.03	OrthoFinder output from all 47 species
AT4G28720	YUC8	Flavin-binding monooxygenase family protein	0.03	OrthoFinder output from all 47 species
AT4G32540	YUC, YUC1	Flavin-binding monooxygenase family protein	0.03	OrthoFinder output from all 47 species
AT5G11320	YUC4	Flavin-binding monooxygenase family protein	0.11	OrthoFinder output from all 47 species
Adi_g078435	YUC5, SUPER1	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Aob_g25697	YUC9	flavin-dependent monooxygenase *(YUCCA) & original...	0.04	OrthoFinder output from all 47 species
Aop_g38092	YUC5, SUPER1	flavin-dependent monooxygenase *(YUCCA) & original...	0.02	OrthoFinder output from all 47 species
Ceric.07G071400.1	YUC9, Ceric.07G071400	flavin-dependent monooxygenase *(YUCCA) & original...	0.05	OrthoFinder output from all 47 species
Dac_g14944	YUC9	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g01534	YUC9	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01015388001	YUC2	Phytohormones.auxin.synthesis.indole-3-pyruvic acid...	0.03	OrthoFinder output from all 47 species
Gb_15900	YUC2	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
Len_g15909	YUC8	flavin-dependent monooxygenase *(YUCCA) & original...	0.02	OrthoFinder output from all 47 species
Len_g48683	YUC4	flavin-dependent monooxygenase *(YUCCA) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g24091	YUC8	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Smo64527	YUC9	Phytohormones.auxin.synthesis.indole-3-pyruvic acid...	0.02	OrthoFinder output from all 47 species
Solyc06g065630.3.1	YUC4, Solyc06g065630	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
Solyc06g083700.4.1	YUC5, SUPER1,...	flavin monooxygenase (YUCCA)	0.02	OrthoFinder output from all 47 species
Solyc09g091870.2.1	YUC10, Solyc09g091870	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
Spa_g52234	YUC5, SUPER1	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Spa_g54960	YUC5, SUPER1	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e016420_P001	YUC2, Zm00001e016420	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
Zm00001e020334_P001	YUC4, Zm00001e020334	flavin monooxygenase (YUCCA)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050661	NADP binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020946	Flavin_mOase-like	18	330

External Links

No external refs found!

LOC_Os01g45760.1 (YUC4, LOC_Os01g45760)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation