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  5. LOC_Os01g46800.1

LOC_Os01g46800.1 (WRKY53, ATWRKY53,...)


Aliases : WRKY53, ATWRKY53, LOC_Os01g46800

Description : transcription factor (WRKY)


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00181570 WRKY6, ATWRKY6,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00103880 WRKY55,... RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00145410 ATWRKY50,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AMTR_s00089p00116340 WRKY2, ATWRKY2,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AT1G29860 ATWRKY71, WRKY71 WRKY DNA-binding protein 71 0.03 OrthoFinder output from all 47 species
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.02 OrthoFinder output from all 47 species
Adi_g074164 ATWRKY58, WRKY58 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16607 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20989 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08492 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33360 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30328 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41346 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30094 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G073500.1 Ceric.31G073500 not classified & original description: pacid=50574451... 0.04 OrthoFinder output from all 47 species
Dcu_g02916 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06101 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13568 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30936 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010525001 WRKY75, ATWRKY75 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01020060001 WRKY72, ATWRKY72 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01022245001 ATWRKY51, WRKY51 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01030174001 WRKY54, ATWRKY54 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
Gb_05025 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_09073 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40261 WRKY75, ATWRKY75 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g09080.1 WRKY72,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g60520.1 WRKY55,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os05g40060.1 WRKY54,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
LOC_Os05g40080.1 WRKY54,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os11g45920.1 WRKY26, LOC_Os11g45920 transcription factor (WRKY) 0.07 OrthoFinder output from all 47 species
Len_g07502 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11805 ATWRKY30, WRKY30 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19187 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22860 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29171 ATWRKY51, WRKY51 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429098g0010 WRKY42, AtWRKY42 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432362g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_114377g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_133396g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_164675g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_23415g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_2535g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_310991g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_52928g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_53351g0010 WRKY2, ATWRKY2 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_6177g0010 AtWRKY41, WRKY41 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_7068293g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_740729g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_74833g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Pir_g04293 No alias WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g032950.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc03g007380.2.1 AtWRKY41,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc04g072070.3.1 ATWRKY51,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc05g050340.4.1 WRKY55,... transcription factor (WRKY) 0.07 OrthoFinder output from all 47 species
Solyc06g048870.3.1 WRKY55,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e004183_P001 AtWRKY41,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e005219_P001 WRKY1, ZAP1,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e020279_P001 WRKY53,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e025935_P001 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e027989_P001 WRKY53,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e028832_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Zm00001e031159_P001 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e034150_P001 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e035859_P001 WRKY46,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e036514_P001 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e038239_P001 WRKY46,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 101 160
No external refs found!