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  5. LOC_Os01g46940.1

LOC_Os01g46940.1 (SBH2, LOC_Os01g46940)


Aliases : SBH2, LOC_Os01g46940

Description : sphingobase hydroxylase


Gene families : OG0001965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46940.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Ala_g01317 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Cba_g13118 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.01 OrthoFinder output from all 47 species
Ceric.30G041100.1 SBH1, Ceric.30G041100 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
MA_17536g0010 SBH2 sphingobase hydroxylase 0.03 OrthoFinder output from all 47 species
Msp_g04438 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Pnu_g01222 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Zm00001e020269_P002 SBH1, Zm00001e020269 sphingobase hydroxylase 0.03 OrthoFinder output from all 47 species
Zm00001e030858_P001 SBH1, Zm00001e030858 sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species
Zm00001e032069_P001 SBH2, Zm00001e032069 sphingobase hydroxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 119 253
No external refs found!