LOC_Os01g47610.1 (LOC_Os01g47610)


Aliases : LOC_Os01g47610

Description : GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana (sp|q680c0|gdl62_arath : 106.0)


Gene families : OG0000838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47610.1

Target Alias Description ECC score Gene Family Method Actions
AT4G10955 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G24190 No alias Lipase class 3-related protein 0.03 OrthoFinder output from all 47 species
Aev_g14416 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g20998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48802 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g05860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08875.t1 Aspi01Gene08875 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11900.t1 Aspi01Gene11900 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11901.t1 Aspi01Gene11901 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32047.t1 Aspi01Gene32047 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43668.t1 Aspi01Gene43668 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68605.t1 Aspi01Gene68605 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68810.t1 Aspi01Gene68810 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0192.g057074 No alias not classified & original description: CDS=41-1099 0.03 OrthoFinder output from all 47 species
Azfi_s0689.g082367 No alias not classified & original description: CDS=1-1290 0.03 OrthoFinder output from all 47 species
Cba_g18777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51579 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g04461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14296 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_11156 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_21917 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g34440.1 LOC_Os07g34440 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10212g0010 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_4245409g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mpzg01010.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010662_P001 Zm00001e010662 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e019946_P001 Zm00001e019946 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e028012_P001 Zm00001e028012 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!