1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g48290.1

LOC_Os01g48290.1 (LOC_Os01g48290)


Aliases : LOC_Os01g48290

Description : transcription factor (DOF)


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48290.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
AMTR_s00119p00099150 CDF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00038440 HCA2, DOF5.6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g002851 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007394 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016287 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056971 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058001 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058754 CDF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074898 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077026 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113482 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04622 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08042 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20056 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06838 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21884 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38452 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22545 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04142 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12576 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26374.t1 Aspi01Gene26374 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43230.t1 OBP4, Aspi01Gene43230 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44456.t1 TMO6, Aspi01Gene44456 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0176.g056104 No alias transcription factor *(DOF) & original description: CDS=1-1632 0.04 OrthoFinder output from all 47 species
Azfi_s0197.g057380 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=242-1003 0.05 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.02 OrthoFinder output from all 47 species
Cba_g25585 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G042700.1 TMO6, Ceric.12G042700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G020200.1 CDF1, Ceric.20G020200 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g521150 CDF2 RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
Dac_g02618 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10863 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11850 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22945 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04621 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44800 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29870 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09129 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16037 ADOF2, DOF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16046 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g28279 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28530 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
GSVIVT01034189001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01038591001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_09906 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Gb_12877 HCA2, DOF5.6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47810.1 HCA2, DOF5.6,... transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os09g29960.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Len_g11115 DAG1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13353 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56635 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g01078 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47967 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03668 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04824 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19321 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03486 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05845 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06748 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24818 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48794 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06441 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18788 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19752 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26540 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02806 DAG1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05155 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11469 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31297 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53347 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012351 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1632 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870 TMO6 transcription factor *(DOF) & original description: CDS=1-1464 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0279.g027089 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1056 0.02 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc11g066050.1.1 Solyc11g066050 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Spa_g09440 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005107_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e017319_P001 CDF2, Zm00001e017319 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e018163_P001 Zm00001e018163 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e020190_P001 Zm00001e020190 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023334_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e029641_P001 OBP3, Zm00001e029641 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 83 136
No external refs found!