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  5. LOC_Os01g52340.1

LOC_Os01g52340.1 (LOC_Os01g52340)


Aliases : LOC_Os01g52340

Description : no hits & (original description: none)


Gene families : OG0014697 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014697_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52340.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g40030.1 LOC_Os01g40030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028197_P001 Zm00001e028197 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041118 Rx_N 9 92
No external refs found!