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  5. LOC_Os01g52480.1

LOC_Os01g52480.1 (LOC_Os01g52480)


Aliases : LOC_Os01g52480

Description : Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thaliana (sp|f4jnx2|sdeh4_arath : 189.0)


Gene families : OG0001274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52480.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00140490 evm_27.TU.AmTr_v1... Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00140820 evm_27.TU.AmTr_v1... Senescence/dehydration-associated protein At4g35985,... 0.04 OrthoFinder output from all 47 species
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.03 OrthoFinder output from all 47 species
Adi_g024818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21104 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09705 ERD7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11231 ERD7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015304001 No alias Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
Gb_39730 ERD7 Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
Len_g16271 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_4456863g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8979358g0010 No alias Senescence/dehydration-associated protein At4g35985,... 0.05 OrthoFinder output from all 47 species
Mp7g01100.1 ERD7 Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
Nbi_g28690 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18030 ERD7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17846 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32922 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo111719 No alias Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
Smo77517 ERD7 Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
Solyc02g062050.3.1 Solyc02g062050 Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
Zm00001e028202_P001 Zm00001e028202 Senescence/dehydration-associated protein At4g35985,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR009686 Senescence/spartin_C 184 369
No external refs found!