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  5. LOC_Os01g52780.1

LOC_Os01g52780.1 (HVA22F, LOC_Os01g52780)


Aliases : HVA22F, LOC_Os01g52780

Description : HVA22-like protein f OS=Arabidopsis thaliana (sp|q682h0|ha22f_arath : 220.0)


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52780.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Als_g01565 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04865 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12350 ATHVA22A, HVA22A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08111 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16128 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54280 ATHVA22A, HVA22A not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 889 965
No external refs found!