LOC_Os01g53020.1 (LOC_Os01g53020)


Aliases : LOC_Os01g53020

Description : Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana (sp|q9fmx6|djc76_arath : 114.0)


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g53020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00027180 evm_27.TU.AmTr_v1... Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g05402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2756.g112948 No alias not classified & original description: CDS=218-898 0.05 OrthoFinder output from all 47 species
Ceric.18G070000.1 Ceric.18G070000 not classified & original description: pacid=50621590... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000525.2 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g009900 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g21558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03038 No alias RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP... 0.05 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020748001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g10921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_213630g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9152890g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g13780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g07196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc07g055260.3.1 Solyc07g055260 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028229_P001 Zm00001e028229 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 78 140
No external refs found!