Aliases : BTI1, RTNLB1, LOC_Os01g53520
Description : ER-associated protein (Reticulon)
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g53520.1 | |
| Cluster | HCCA: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G15280 | No alias | Reticulon family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g020105 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055054 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09568 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G055300.1 | Ceric.22G055300 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019440001 | No alias | Reticulon-like protein B4 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Len_g22662 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8439835g0010 | RTNLB4, BTI3 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g23134 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37046 | BTI1, RTNLB1 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c3_26340V3.1 | RTNLB3, Pp3c3_26340 | Reticulon family protein | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g107620.4.1 | Solyc01g107620 | ER-associated protein (Reticulon) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g049060.3.1 | Solyc06g049060 | ER-associated protein (Reticulon) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g011870.3.1 | Solyc10g011870 | ER-associated protein (Reticulon) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006599_P001 | Zm00001e006599 | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019265_P002 | Zm00001e019265 | ER-associated protein (Reticulon) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 69 | 223 |
| No external refs found! |
