LOC_Os01g54340.1 (LOC_Os01g54340)


Aliases : LOC_Os01g54340

Description : no hits & (original description: none)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g54340.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00020p00161780 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00034070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.08 OrthoFinder output from all 47 species
AT4G32480 No alias Protein of unknown function (DUF506) 0.04 OrthoFinder output from all 47 species
Ala_g01830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.02 OrthoFinder output from all 47 species
Ceric.17G023400.1 Ceric.17G023400 not classified & original description: pacid=50618778... 0.03 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.04 OrthoFinder output from all 47 species
Cre16.g693819 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g03585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_39164 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g74250.1 LOC_Os01g74250 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g06680.1 LOC_Os03g06680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g58230.1 LOC_Os03g58230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g02311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10117499g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_279654g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001909 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Spa_g06813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011452_P001 Zm00001e011452 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 12 232
No external refs found!