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  5. LOC_Os01g55370.1

LOC_Os01g55370.1 (LOC_Os01g55370)


Aliases : LOC_Os01g55370

Description : no hits & (original description: none)


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55370.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00060450 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00054880 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00043220 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00171390 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G06980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
AT1G18290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT1G76600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
AT2G23690 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT4G02090 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
AT5G17350 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT5G66580 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g012199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033773 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g050704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10917 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23035 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g23563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13906.t1 Aspi01Gene13906 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30435.t1 Aspi01Gene30435 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34873.t1 Aspi01Gene34873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36870.t1 Aspi01Gene36870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36878.t1 Aspi01Gene36878 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36907.t1 Aspi01Gene36907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36924.t1 Aspi01Gene36924 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65672.t1 Aspi01Gene65672 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68687.t1 Aspi01Gene68687 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68688.t1 Aspi01Gene68688 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68691.t1 Aspi01Gene68691 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68694.t1 Aspi01Gene68694 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68695.t1 Aspi01Gene68695 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68697.t1 Aspi01Gene68697 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68698.t1 Aspi01Gene68698 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68699.t1 Aspi01Gene68699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68702.t1 Aspi01Gene68702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68716.t1 Aspi01Gene68716 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68759.t1 Aspi01Gene68759 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59869 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g74648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G096700.1 Ceric.14G096700 not classified & original description: pacid=50634186... 0.03 OrthoFinder output from all 47 species
Ceric.14G096800.1 Ceric.14G096800 not classified & original description: pacid=50633991... 0.02 OrthoFinder output from all 47 species
Ceric.14G097000.1 Ceric.14G097000 not classified & original description: pacid=50633954... 0.02 OrthoFinder output from all 47 species
Ceric.14G097100.1 Ceric.14G097100 not classified & original description: pacid=50633776... 0.02 OrthoFinder output from all 47 species
Ceric.16G032900.1 Ceric.16G032900 not classified & original description: pacid=50589857... 0.03 OrthoFinder output from all 47 species
Ceric.16G033100.1 Ceric.16G033100 not classified & original description: pacid=50589567... 0.03 OrthoFinder output from all 47 species
Ceric.1Z035600.1 Ceric.1Z035600 not classified & original description: pacid=50602495... 0.03 OrthoFinder output from all 47 species
Ceric.24G013000.1 Ceric.24G013000 not classified & original description: pacid=50629345... 0.03 OrthoFinder output from all 47 species
Ceric.26G065000.1 Ceric.26G065000 not classified & original description: pacid=50598973... 0.03 OrthoFinder output from all 47 species
Ceric.26G065100.1 Ceric.26G065100 not classified & original description: pacid=50599287... 0.02 OrthoFinder output from all 47 species
Ceric.29G014700.1 Ceric.29G014700 not classified & original description: pacid=50624719... 0.02 OrthoFinder output from all 47 species
Dac_g02028 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19771 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003763001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01003765001 No alias STS14 protein OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
GSVIVT01013456001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_01099 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05757 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05765 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05766 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_06364 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_29302 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35301 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35304 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_41646 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g03080.1 LOC_Os01g03080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09990.1 LOC_Os02g09990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g18660.1 LOC_Os03g18660 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g39710.1 LOC_Os05g39710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32000.1 LOC_Os09g32000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10165933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10296634g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427211g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427270g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10427551g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10428693g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432844g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119175g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_120551g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_152921g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_224816g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_24094g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_31046g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_38919g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_390260g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4985671g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_59045g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_76101g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7767108g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_804676g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87298g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8933146g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_897390g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9762162g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g03220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g10000.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g18590.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g18700.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g18144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60781 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo440323 No alias No description available 0.01 OrthoFinder output from all 47 species
Solyc01g079550.2.1 Solyc01g079550 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g109250.2.1 Solyc01g109250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g089990.1.1 Solyc02g089990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g091180.1.1 Solyc02g091180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g006160.1.1 Solyc03g006160 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc04g007580.1.1 Solyc04g007580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g007370.1.1 Solyc06g007370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g02891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005807_P001 Zm00001e005807 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011957_P001 Zm00001e011957 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e020136_P001 Zm00001e020136 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034559_P001 Zm00001e034559 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e042459_P001 Zm00001e042459 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 9 192
No external refs found!