LOC_Os01g55690.1 (CRU1, CRA1, ATCRA1,...)


Aliases : CRU1, CRA1, ATCRA1, LOC_Os01g55690

Description : Glutelin type-A 1 OS=Oryza sativa subsp. japonica (sp|p07728|glua1_orysj : 911.0)


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55690.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G03880 CRU2, CRB cruciferin 2 0.04 OrthoFinder output from all 47 species
AT1G03890 No alias RmlC-like cupins superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G28520 CRU3, CRC cruciferin 3 0.04 OrthoFinder output from all 47 species
AT5G44120 CRU1, CRA1, ATCRA1 RmlC-like cupins superfamily protein 0.04 OrthoFinder output from all 47 species
Dde_g19386 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Gb_01530 CRU2, CRB no description available(sp|a0a222nnm9|cos1_cocnu : 359.0) 0.02 OrthoFinder output from all 47 species
Gb_12801 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.02 OrthoFinder output from all 47 species
Gb_30214 CRU1, CRA1, ATCRA1 no description available(sp|a0a1l6k371|jugn4_jugni : 301.0) 0.02 OrthoFinder output from all 47 species
LOC_Os09g37976.1 LOC_Os09g37976 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Spa_g43375 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e029673_P002 Zm00001e029673 Glutelin type-B 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 52 210
IPR006045 Cupin_1 320 467
No external refs found!