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  5. LOC_Os01g57390.1

LOC_Os01g57390.1 (LOC_Os01g57390)


Aliases : LOC_Os01g57390

Description : no hits & (original description: none)


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g57390.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271140 evm_27.TU.AmTr_v1... No description available 0.12 OrthoFinder output from all 47 species
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.1 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.03 OrthoFinder output from all 47 species
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g060075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082491 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26521 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30349 No alias 2S globulin seed storage protein & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g30357 No alias 2S globulin seed storage protein & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g32400 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33127 No alias 2S globulin seed storage protein & original description: none 0.09 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02791 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21301 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g24438 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38143 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64637 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05703.t1 Aspi01Gene05703 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14065.t1 Aspi01Gene14065 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14067.t1 BGLU42, Aspi01Gene14067 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55008.t1 Aspi01Gene55008 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55009.t1 Aspi01Gene55009 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55010.t1 Aspi01Gene55010 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68849.t1 Aspi01Gene68849 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g59888 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G065600.1 Ceric.14G065600 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G066400.1 Ceric.14G066400 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G084700.1 Ceric.14G084700 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z042600.1 Ceric.1Z042600 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z042900.1 Ceric.1Z042900 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z043100.1 Ceric.1Z043100 not classified & original description: pacid=50597076... 0.02 OrthoFinder output from all 47 species
Ceric.1Z210700.1 Ceric.1Z210700 2S globulin seed storage protein & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.1Z210800.1 Ceric.1Z210800 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Cre06.g304913 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07283 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09810 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28835 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g18860 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29297 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29930 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g33452 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09037 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.07 OrthoFinder output from all 47 species
Gb_07285 No alias no description available(sp|q7m443|chit2_tulsb : 215.0) 0.03 OrthoFinder output from all 47 species
Gb_07286 No alias no description available(sp|q9slp4|chit1_tulsb : 171.0) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28050.1 LOC_Os10g28050 no description available(sp|q7m443|chit2_tulsb : 285.0) 0.04 OrthoFinder output from all 47 species
LOC_Os10g28080.1 LOC_Os10g28080 no description available(sp|q9slp4|chit1_tulsb : 266.0) 0.07 OrthoFinder output from all 47 species
LOC_Os10g28120.1 LOC_Os10g28120 no description available(sp|q7m443|chit2_tulsb : 292.0) 0.04 OrthoFinder output from all 47 species
Len_g43213 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Len_g46226 No alias 2S globulin seed storage protein & original description: none 0.08 OrthoFinder output from all 47 species
Len_g50580 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Len_g50581 No alias 2S globulin seed storage protein & original description: none 0.12 OrthoFinder output from all 47 species
Len_g50689 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Len_g51292 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Mp5g12520.1 HCHIB, B-CHI,... no description available(sp|q7m443|chit2_tulsb : 125.0) 0.01 OrthoFinder output from all 47 species
Msp_g12684 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29733 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07818 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36424 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g30590 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g32653 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g03759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22062 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32505 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30465 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.03 OrthoFinder output from all 47 species
Spa_g40975 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41882 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46052 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35737 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g36586 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g37745 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41842 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.05 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.04 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.09 OrthoFinder output from all 47 species
Zm00001e028945_P001 Zm00001e028945 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 63 108
No external refs found!