LOC_Os01g57450.1 (LOC_Os01g57450)


Aliases : LOC_Os01g57450

Description : Universal stress protein PHOS32 OS=Arabidopsis thaliana (sp|q8vyn9|pho32_arath : 187.0)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g57450.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00034700 evm_27.TU.AmTr_v1... Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0091.g042829 No alias not classified & original description: CDS=1-378 0.03 OrthoFinder output from all 47 species
Cba_g27830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G021300.1 Ceric.24G021300 not classified & original description: pacid=50629890... 0.03 OrthoFinder output from all 47 species
Dac_g03033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003679001 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_02091 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_22308 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_24984 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00168 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000709 No alias not classified & original description: CDS=1-528 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022124 No alias not classified & original description: CDS=790-1359 0.03 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g31160 No alias HUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039685_P001 Zm00001e039685 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 60 223
No external refs found!