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  5. LOC_Os01g63240.1

LOC_Os01g63240.1 (LOC_Os01g63240)


Aliases : LOC_Os01g63240

Description : ER-associated protein (Reticulon)


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g63240.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00178230 evm_27.TU.AmTr_v1... Reticulon-like protein B5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G01230 No alias Reticulon family protein 0.04 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g308950 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g13025 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01005053001 RTNLB13 Reticulon-like protein B13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ppi_g07402 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Solyc03g119190.3.1 Solyc03g119190 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Zm00001e006599_P001 Zm00001e006599 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Zm00001e031369_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 27 183
No external refs found!