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  5. LOC_Os01g70030.1

LOC_Os01g70030.1 (LOC_Os01g70030)


Aliases : LOC_Os01g70030

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70030.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04140.1 LOC_Os01g04140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g34360.1 LOC_Os01g34360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g56780.1 LOC_Os02g56780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g20460.1 LOC_Os04g20460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g14460.1 LOC_Os05g14460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g19700.1 LOC_Os05g19700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40400.1 LOC_Os06g40400 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g11430.1 LOC_Os07g11430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g08950.1 LOC_Os08g08950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g09420.1 LOC_Os09g09420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g12170.1 LOC_Os09g12170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g26250.1 LOC_Os11g26250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g35940.1 LOC_Os11g35940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g45490.1 LOC_Os11g45490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03770.1 LOC_Os12g03770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g26070.1 LOC_Os12g26070 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g31980.1 LOC_Os12g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 766 803
No external refs found!