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  5. LOC_Os01g70560.1

LOC_Os01g70560.1 (LOC_Os01g70560)


Aliases : LOC_Os01g70560

Description : no hits & (original description: none)


Gene families : OG0001508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70560.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00213010 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AT3G01450 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15830 No alias ARM repeat superfamily protein 0.21 OrthoFinder output from all 47 species
Ala_g10976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010494 No alias not classified & original description: CDS=698-1747 0.02 OrthoFinder output from all 47 species
Ceric.33G045600.1 Ceric.33G045600 not classified & original description: pacid=50606932... 0.03 OrthoFinder output from all 47 species
Dac_g08508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017734001 No alias No description available 0.24 OrthoFinder output from all 47 species
Gb_18598 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g00468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080750.3.1 Solyc01g080750 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Spa_g55753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028379_P001 Zm00001e028379 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 115 274
No external refs found!