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  5. LOC_Os01g70790.1

LOC_Os01g70790.1 (LOC_Os01g70790)


Aliases : LOC_Os01g70790

Description : Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 104.0)


Gene families : OG0000271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70790.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00209740 SRC2, (AT)SRC2,... Protein SRC2 OS=Glycine max 0.08 OrthoFinder output from all 47 species
AT1G04540 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
AT1G09070 SRC2, (AT)SRC2 soybean gene regulated by cold-2 0.1 OrthoFinder output from all 47 species
AT2G13350 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
AT3G05440 No alias C2 domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g040080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g041188 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Adi_g047558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104427 SRC2, (AT)SRC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39738 SRC2, (AT)SRC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17231 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Als_g09602 SRC2, (AT)SRC2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g39933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45258 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Aop_g04143 No alias ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Aop_g14102 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.07 OrthoFinder output from all 47 species
Aop_g18713 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.07 OrthoFinder output from all 47 species
Aop_g45977 No alias ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34089.t1 Aspi01Gene34089 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71781 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Ceric.11G051400.1 SRC2, (AT)SRC2,... not classified & original description: pacid=50596485... 0.04 OrthoFinder output from all 47 species
Ceric.11G051600.1 SRC2, (AT)SRC2,... not classified & original description: pacid=50595393... 0.03 OrthoFinder output from all 47 species
Ceric.28G036200.1 Ceric.28G036200 not classified & original description: pacid=50569901... 0.03 OrthoFinder output from all 47 species
Dac_g01443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32667 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.06 OrthoFinder output from all 47 species
Dcu_g02569 SRC2, (AT)SRC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07782 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031119001 SRC2, (AT)SRC2 Protein SRC2 OS=Glycine max 0.03 OrthoFinder output from all 47 species
Gb_01955 SRC2, (AT)SRC2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09310 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09311 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_28398 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28884 SRC2, (AT)SRC2 BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.03 OrthoFinder output from all 47 species
Gb_28889 SRC2, (AT)SRC2 BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.1 OrthoFinder output from all 47 species
Gb_28892 SRC2, (AT)SRC2 BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g47400.1 LOC_Os07g47400 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 85.9) 0.02 OrthoFinder output from all 47 species
Len_g19371 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Len_g21649 SRC2, (AT)SRC2 co-suppressor (BAP) of Programmed Cell Death & original... 0.05 OrthoFinder output from all 47 species
Lfl_g38079 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.07 OrthoFinder output from all 47 species
MA_10427865g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_5321101g0010 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_93411g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g08510.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp5g03770.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g00390.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g30797 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.07 OrthoFinder output from all 47 species
Nbi_g05226 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Nbi_g06932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34599 SRC2, (AT)SRC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18750 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.07 OrthoFinder output from all 47 species
Pir_g47026 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Pp3c15_1050V3.1 Pp3c15_1050 Calcium-dependent lipid-binding (CaLB domain) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g17667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g017994 No alias not classified & original description: CDS=1-750 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0166.g024144 SRC2, (AT)SRC2 not classified & original description: CDS=1-696 0.04 OrthoFinder output from all 47 species
Smo441151 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo443351 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo444587 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g005420.2.1 Solyc01g005420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g099370.3.1 SRC2, (AT)SRC2,... Protein SRC2 homolog OS=Arabidopsis thaliana... 0.15 OrthoFinder output from all 47 species
Solyc03g005720.3.1 Solyc03g005720 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g028990.1.1 SRC2, (AT)SRC2,... Protein SRC2 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g090920.4.1 Solyc09g090920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g096970.2.1 Solyc12g096970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11023 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Spa_g13406 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Spa_g29309 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Spa_g40132 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Spa_g48893 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Tin_g07202 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.05 OrthoFinder output from all 47 species
Zm00001e018728_P001 Zm00001e018728 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 101.0) 0.11 OrthoFinder output from all 47 species
Zm00001e019101_P001 Zm00001e019101 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028370_P001 Zm00001e028370 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 105.0) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 5 102
No external refs found!