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  5. LOC_Os01g70870.1

LOC_Os01g70870.1 (IDD2, AtIDD2, LOC_Os01g70870)


Aliases : IDD2, AtIDD2, LOC_Os01g70870

Description : C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70870.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT1G55110 AtIDD7, IDD7 indeterminate(ID)-domain 7 0.02 OrthoFinder output from all 47 species
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.02 OrthoFinder output from all 47 species
Adi_g009975 AtIDD7, IDD7 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g012802 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g037049 No alias C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g048017 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g068284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069013 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g06786 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56444 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g13410 IDD16, AtIDD16 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21463.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23688.t1 MGP, Aspi01Gene23688 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene57591.t1 MGP, Aspi01Gene57591 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72333.t1 MGP, Aspi01Gene72333 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008481 IDD16, AtIDD16 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g72735 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G065400.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G030700.1 MGP, Ceric.17G030700 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G030700.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.33G056300.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g04697 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06723 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g28879 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g16536 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07051 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g17431 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18226 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010283001 IDD5, AtIDD5 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01025658001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01031112001 IDD2, AtIDD2 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
LOC_Os03g13400.1 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g01314 NUC C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_10431498g0010 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_12028g0010 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_26324g0010 MGP C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g07810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g08806 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g16325 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g17643 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g33896 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g27424 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g31312 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g65810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g09916 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g20764 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g09226 MGP C2H2 subclass IDD transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ppi_g15199 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020376 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g26816 No alias C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo93509 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc02g085580.4.1 Solyc02g085580 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g062670.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc09g074780.3.1 NUC, Solyc09g074780 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g069240.2.1 Solyc11g069240 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g39904 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g29144 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g30837 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016559_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e018716_P001 MGP, Zm00001e018716 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e026143_P001 MGP, Zm00001e026143 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 81 103
No external refs found!