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  5. LOC_Os01g72370.1

LOC_Os01g72370.1 (BHLH100, LOC_Os01g72370)


Aliases : BHLH100, LOC_Os01g72370

Description : transcription factor (bHLH). iron/copper homeostasis regulator. bHLH-Ib iron/copper homeostasis regulator


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72370.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00154030 ORG2, BHLH038,... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.03 OrthoFinder output from all 47 species
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G41240 BHLH100 basic helix-loop-helix protein 100 0.14 OrthoFinder output from all 47 species
AT3G56970 ORG2, BHLH038 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.13 OrthoFinder output from all 47 species
AT3G56980 ORG3, BHLH039 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.13 OrthoFinder output from all 47 species
AT4G20970 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G04150 BHLH101 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.14 OrthoFinder output from all 47 species
MA_321195g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_57970g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc03g114230.2.1 Solyc03g114230 Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g008260.2.1 Solyc10g008260 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc10g079650.2.1 BHLH100, Solyc10g079650 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
Solyc10g079660.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
Zm00001e018588_P001 BHLH100, Zm00001e018588 transcription factor (bHLH). iron/copper homeostasis... 0.05 OrthoFinder output from all 47 species
Zm00001e028309_P001 ORG3, BHLH039,... transcription factor (bHLH). iron/copper homeostasis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0019008 molybdopterin synthase complex IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 69 121
No external refs found!