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  5. LOC_Os01g72910.1

LOC_Os01g72910.1 (LOC_Os01g72910)


Aliases : LOC_Os01g72910

Description : no hits & (original description: none)


Gene families : OG0000106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72910.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Adi_g010176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10404.t1 Aspi01Gene10404 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10407.t1 Aspi01Gene10407 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10410.t1 Aspi01Gene10410 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10411.t1 Aspi01Gene10411 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10413.t1 Aspi01Gene10413 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10417.t1 Aspi01Gene10417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10418.t1 Aspi01Gene10418 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10632.t1 Aspi01Gene10632 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10636.t1 Aspi01Gene10636 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11805.t1 Aspi01Gene11805 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19705.t1 Aspi01Gene19705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19707.t1 Aspi01Gene19707 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19712.t1 Aspi01Gene19712 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19715.t1 Aspi01Gene19715 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19717.t1 Aspi01Gene19717 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19718.t1 Aspi01Gene19718 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19720.t1 Aspi01Gene19720 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52866.t1 Aspi01Gene52866 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52870.t1 Aspi01Gene52870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52871.t1 Aspi01Gene52871 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52872.t1 Aspi01Gene52872 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65003.t1 Aspi01Gene65003 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65007.t1 Aspi01Gene65007 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65008.t1 Aspi01Gene65008 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65012.t1 Aspi01Gene65012 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65439.t1 Aspi01Gene65439 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g46435 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g70136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G059500.1 Ceric.21G059500 not classified & original description: pacid=50603450... 0.02 OrthoFinder output from all 47 species
Ceric.21G060500.1 Ceric.21G060500 not classified & original description: pacid=50603441... 0.02 OrthoFinder output from all 47 species
Ceric.29G052800.1 Ceric.29G052800 not classified & original description: pacid=50624376... 0.02 OrthoFinder output from all 47 species
Ceric.31G001300.1 Ceric.31G001300 not classified & original description: pacid=50574301... 0.02 OrthoFinder output from all 47 species
Dac_g18082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_12742 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_12743 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18966 No alias no description available(sp|q53jf7|asr5_orysj : 98.2) 0.01 OrthoFinder output from all 47 species
Len_g13017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_225419g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_470517g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_470517g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_785227g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8226804g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_89246g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g071600.3.1 Solyc04g071600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g35605 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g48721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014777_P001 Zm00001e014777 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e017611_P001 Zm00001e017611 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e017612_P001 Zm00001e017612 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003496 ABA_WDS 23 99
No external refs found!