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  5. LOC_Os01g74450.1

LOC_Os01g74450.1 (ATTIP1.3, TIP1;3,...)


Aliases : ATTIP1.3, TIP1;3, GAMMA-TIP3, LOC_Os01g74450

Description : tonoplast intrinsic protein (TIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g74450.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00023270 PIP2D, PIP2;5,... Solute transport.channels.MIP family.plasma membrane... 0.02 OrthoFinder output from all 47 species
AMTR_s00171p00047680 BETA-TIP,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.04 OrthoFinder output from all 47 species
AT2G39010 PIP2E, PIP2;6 plasma membrane intrinsic protein 2E 0.03 OrthoFinder output from all 47 species
AT4G23400 PIP1;5, PIP1D plasma membrane intrinsic protein 1;5 0.03 OrthoFinder output from all 47 species
Ala_g23321 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G015500.1 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G031100.1 ATTIP2;1,... not classified & original description: pacid=50582452... 0.04 OrthoFinder output from all 47 species
Dcu_g02506 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03237 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.05 OrthoFinder output from all 47 species
LOC_Os01g13120.1 TIP4;1, LOC_Os01g13120 tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44060.1 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
Len_g02168 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434016g0010 PIP1C, TMP-B, PIP1;3 Aquaporin PIP1-3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g04190.1 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.01 OrthoFinder output from all 47 species
Mp2g13930.1 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Mp4g17210.1 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Msp_g19561 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ore_g16159 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Ore_g20773 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.05 OrthoFinder output from all 47 species
Pir_g32460 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Pir_g59553 BETA-TIP tonoplast intrinsic protein *(TIP) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12265 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g14764 ATTIP2;1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g096290.3.1 TMP-C, PIP1;4,... plasma membrane intrinsic protein (PIP) 0.06 OrthoFinder output from all 47 species
Spa_g56926 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009547_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
Zm00001e027152_P001 TIP4;1, Zm00001e027152 tonoplast intrinsic protein (TIP) 0.05 OrthoFinder output from all 47 species
Zm00001e033411_P002 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 14 234
No external refs found!