Aliases : RAB, RBE, LOC_Os02g01090
Description : C2H2 zinc finger transcription factor
Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g01090.1 | |
| Cluster | HCCA: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00181650 | KNU,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00024p00186840 | GIS,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00109960 | JAG,... | Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00149p00097070 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G13400 | JGL, NUB | C2H2 and C2HC zinc fingers superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G67030 | ZFP6 | zinc finger protein 6 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G42410 | ZFP11, ATZFP11 | zinc finger protein 11 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G23130 | SUP, FLO10, FON1 | C2H2 and C2HC zinc fingers superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G10970 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G57520 | ATZFP2, ZFP2 | zinc finger protein 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009388 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024673 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025780 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11579 | ZFP8 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20041 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g28126 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g27414 | ZFP4 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03058.t1 | ZFP10, ATZFP10,... | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03060.t1 | ZFP10, ATZFP10,... | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene56786.t1 | Aspi01Gene56786 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61235.t1 | Aspi01Gene61235 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011541 | ZFP10, ATZFP10 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0014.g013503 | GIS2 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035758 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G034400.1 | ZFP1, ATZFP1,... | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G040400.1 | ZFP7, Ceric.08G040400 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G037400.1 | ZFP10, ATZFP10,... | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00776 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01985 | ZFP7 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13927 | GIS2 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011868001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013168001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027719001 | SUP, FLO10, FON1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028555001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031007001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037897001 | ZFP1, ATZFP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10074 | ZFP10, ATZFP10 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g23477 | ATZFP2, ZFP2 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24190 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_110160g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_114098g0010 | ZFP6 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_5999529g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10608 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30209 | ZFP10, ATZFP10 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g00812 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g11111 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12483 | JGL, NUB | transcriptional regulator *(JAG/NUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59122 | ZFP5 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g009380.4.1 | JAG, Solyc05g009380 | Zinc finger protein JAGGED OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g053720.3.1 | SUP, FLO10,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g011120.1.1 | ZFP10, ATZFP10,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g080600.3.1 | GIS, Solyc10g080600 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05801 | GIS | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53718 | ZFP11, ATZFP11 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13937 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005916_P001 | Zm00001e005916 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009853_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011910_P001 | Zm00001e011910 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017009_P001 | Zm00001e017009 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022212_P001 | ZFP8, Zm00001e022212 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025746_P001 | Zm00001e025746 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030783_P001 | ZFP8, Zm00001e030783 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032639_P001 | ZFP10, ATZFP10,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034883_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036220_P001 | ZFP8, Zm00001e036220 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037946_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040612_P001 | ZFP11, ATZFP11,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040940_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
