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  5. LOC_Os02g02500.1

LOC_Os02g02500.1 (LOC_Os02g02500)


Aliases : LOC_Os02g02500

Description : no hits & (original description: none)


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g02500.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G02170 No alias Remorin family protein 0.04 OrthoFinder output from all 47 species
Adi_g017303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44820.t1 Aspi01Gene44820 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.34G020100.1 Ceric.34G020100 not classified & original description: pacid=50623092... 0.04 OrthoFinder output from all 47 species
Dac_g02817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41400 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g14382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010242001 No alias No description available 0.1 OrthoFinder output from all 47 species
LOC_Os03g02840.1 LOC_Os03g02840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_173856g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024675 No alias not classified & original description: CDS=2620-4236 0.03 OrthoFinder output from all 47 species
Solyc05g014710.4.1 Solyc05g014710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g06541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006902_P001 Zm00001e006902 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025360_P003 Zm00001e025360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 398 501
No external refs found!